Article
Pre- and post-sequencing recommendations for functional annotation of human fecal metagenomes
2019-09-08
Abstract excerpt
<h4>Background</h4> Shotgun metagenomes are often assembled prior to annotation of genes which biases the functional capacity of a community towards its most abundant members. For an unbiased assessment of community function, short reads need to be mapped directly to a gene or protein database. The ability to detect genes in short read sequences is dependent on pre- and post-sequencing decisions. The objective of...
Topics
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- Bacterial Identification and Susceptibility Testing
- Clostridium difficile and Clostridium perfringens research
- Dermatology and Skin Diseases
- Gut microbiota and health
- Mycobacterium research and diagnosis
- Plant and Fungal Interactions Research
- Plant Pathogens and Fungal Diseases
- Probiotics and Fermented Foods
Identifiers and source
- Literature Corpus work
- 8f5df33c-26fc-5419-a8ed-56fa29511dad
- DOI
- 10.1101/760207
