Article

Novel transcriptomic events discovery in esophageal cancer via alignment-free protocol

2022-07-27

Abstract excerpt

ABSTRACT Background The combination of epigenetics, genomic variation, and transcriptional regulatory variation determines the identity of cancer cells. The differences determining the phenotype are frequently represented in transcriptome expression differences or peptides and proteins with generated aberrant structures. As a result, RNA-seq data is a valuable resource for discovering pathogenic variations. Metho...

Topics

Open a Topic to create a Post that cites this publication.

Identifiers and source

Literature Corpus work: ebfe5e06-c899-57c3-aecc-2aad0799db31
DOI: 10.21203/rs.3.rs-1871713/v1

Open publication

Related research

Semantic proximity does not establish scientific evidence.

Click a neighbor to travelStep 1 · 12 closest

Novel transcriptomic events discovery in esophageal cancer via alignment-free protocolDOI 10.21203/rs.3.rs-1871713/v1Read

Capture of transcriptomic events in Stomach Adenocarcinoma integrating alignment-based and alignment-free protocolsSemantic proximity Read

Reference-free inferring of transcriptomic events in cancer cells on single-cell dataSemantic proximity Read

The contribution of uncharted RNA sequences to tumor identity in lung adenocarcinomaSemantic proximity Read

Multi-omics integration in Esophageal Adenocarcinoma reveals therapeutic targets and EAC-specific regulation of protein abundancesSemantic proximity Read

An isoform-resolution transcriptomic atlas of colorectal cancer from long-read single-cell sequencingSemantic proximity Read

Multi-Omic Analysis of Esophageal Adenocarcinoma Uncovers Candidate Therapeutic Targets and Cancer-Selective Posttranscriptional RegulationSemantic proximity Read

Alternative Splicing Events and Subtype Analysis of Esophageal CancerSemantic proximity Read

A genome‐wide analysis of long noncoding RNA profile identifies differentially expressed lnc RNA s associated with Esophageal cancerSemantic proximity Read

Pervasive Intronic Polyadenylation Serves as a Potential Source of Cancer NeoantigensSemantic proximity Read

A map of Non-translated RNA (nt-RNA) junctions in cancer genomes: a database resource of unproductive splicingSemantic proximity Read

Exploring the Dark Matter of Human Proteome: The Emerging Role of Non-Canonical Open Reading Frame (ncORF) in Cancer Diagnosis, Biology, and TherapySemantic proximity Read

Novel CAF-identifiers via transcriptomic analysis in oral cancer patientsSemantic proximity Read