Article

Addressing dereplication crisis: Taxonomy-free reduction of massive genome collections using embeddings of protein content

2019-11-25

Abstract excerpt

Many recent microbial genome collections curate hundreds of thousands of genomes. This volume complicates many genomic analyses such as taxon assignment because the associated computational burden is substantial. However, the number of representatives of each species is highly skewed towards human pathogens and model organisms. Thus many genomes contain little additional information and could be removed. We create...

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Literature Corpus work: e87faaea-79b3-5903-8bd6-889f5c07abb6
DOI: 10.1101/855262

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