Article
PPanGGOLiN: depicting microbial diversity via a partitioned pangenome graph
2019-11-09
Abstract excerpt
The use of comparative genomics for functional, evolutionary, and epidemiological studies requires methods to classify gene families in terms of occurrence in a given species. These methods usually lack multivariate statistical models to infer the partitions and the optimal number of classes and don’t account for genome organization. We introduce a graph structure to model pangenomes in which nodes represent gene...
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Identifiers and source
- Literature Corpus work
- e79b0f71-0a0d-53d3-aac1-15e979b0f03a
- DOI
- 10.1101/836239