Article

Identification of potential SARS-CoV-2 genetic markers resulting from host domestication

2024-07-29

Abstract excerpt

We developed a k -mer-based pipeline, namely the Pathogen Origin Recognition Tool using Enriched K -mers (PORT-EK) to identify genomic regions enriched in the respective hosts after the comparison of metagenomes of isolates between two host species. Using it we identified thousands of k -mers enriched in US white-tailed deer and betacoronaviruses in bat reservoirs while comparing them with human isolates. We de...

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Literature Corpus work: d95acff4-bf53-5f34-8b97-6544af2296d3
DOI: 10.1101/2024.07.27.605454

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