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Accessible, curated metagenomic data through ExperimentHub

2017-01-27

Abstract excerpt

We present curatedMetagenomicData, a Bioconductor and command-line interface to thousands of metagenomic profiles from the Human Microbiome Project and other publicly available datasets, and ExperimentHub, a platform for convenient cloud-based distribution of data to the R desktop. The resource provides standardized per-participant metadata linked to bacterial, fungal, archaeal, and viral taxonomic abundances, as...

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Identifiers and source

Literature Corpus work
d69a951d-c02d-588e-84bd-9e725152435e
DOI
10.1101/103085
Open publication

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