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GTX-GUT: A Standardized Metagenomic Workflow for Gut Microbiome Profiling and Clinical Associations

2026-08-15

Abstract excerpt

The human gut microbiome plays a central role in host physiology and disease, yet metagenomic analysis pipelines remain fragmented across sample preparation, taxonomic classification, and clinical interpretation stages, complicating reproducibility and translational use. Here we present GTX-GUT, a fully automated, containerized Snakemake pipeline for 16S rRNA gut microbiome profiling that integrates quality contro...

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Literature Corpus work
8590a850-41b3-544b-be29-68a3a0c8461d
DOI
10.64898/2026.08.12.744496
Open publication

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GTX-GUT: A Standardized Metagenomic Workflow for Gut Microbiome Profiling and Clinical AssociationsDOI 10.64898/2026.08.12.744496
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