Article

DeepSpot: Leveraging Spatial Context for Enhanced Spatial Transcriptomics Prediction from H&E Images

2025-02-12

Abstract excerpt

Spatial transcriptomics technology remains resource-intensive and unlikely to be routinely adopted for patient care soon. This hinders the development of novel precision medicine solutions and, more importantly, limits the translation of research findings to patient treatment. Here, we present DeepSpot, a deep-set neural network that leverages recent foundation models in pathology and spatial multi-level tissue co...

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Literature Corpus work: be538eee-3b01-550d-b790-469d4b3a21f9
DOI: 10.1101/2025.02.09.25321567

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