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REPrise: <i>de novo</i> interspersed repeat detection using inexact seeding

2024-01-24

Abstract excerpt

<h4>Motivation</h4> Interspersed repeats occupy a large part of many eukaryotic genomes, and thus their accurate annotation is essential for various genome analyses. Database-free de novo repeat detection approaches are powerful for annotating genomes that lack well-curated repeat databases. However, existing tools do not yet have sufficient repeat detection performance. <h4>Results</h4> In this study, we deve...

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Identifiers and source

Literature Corpus work
bdd31140-f71b-517a-9898-9156d47d4c46
DOI
10.1101/2024.01.21.576581
Open publication

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REPrise: <i>de novo</i> interspersed repeat detection using inexact seedingDOI 10.1101/2024.01.21.576581
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