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Article

STAR: an algorithm to Search for Tandem Approximate Repeats.

Bioinformatics (Oxford, England) - 1 Nov 2004

Delgrange Olivier, Rivals Eric

Abstract excerpt

MOTIVATION: Tandem repeats consist in approximate and adjacent repetitions of a DNA motif. Such repeats account for large portions of eukaryotic genomes and have also been found in other life kingdoms. Owing to their polymorphism, tandem repeats have proven useful in genome cartography, forensic and population studies, etc. Nevertheless, they are not systematically detected nor annotated in genome projects....

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Source

Identifiers

PMID: 15180940
DOI: 10.1093/bioinformatics/bth335

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ATR

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STAR: an algorithm to Search for Tandem Approximate Repeats.PMID 15180940Read ↗

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Reconstructing the duplication history of a tandem repeat.Semantic proximity Read ↗

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Building alternative splicing and evolution-aware sequence-structure maps for protein repeatsSemantic proximity Read ↗

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TRbase: a database relating tandem repeats to disease genes for the human genome.Semantic proximity Read ↗

Tandem repeats discovery service (TReaDS) applied to finding novel cis-acting factors in repeat expansion diseases.Semantic proximity Read ↗

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