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Human outbreak detection and best practice MPXV analysis and interpretation with squirrel

2025-08-13

Abstract excerpt

High numbers of reported mpox cases and recent identification of multiple sustained human outbreaks of MPXV have highlighted the need for robust, best-practice genomic surveillance tools. In light of the SARS-CoV-2 pandemic, many labs across the globe developed the capacity to do virus genome sequencing, however MPXV presents additional analytical challenges due to its large genome size, tracts of low-complexity o...

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Literature Corpus work
9bc76dbf-093e-529a-a008-b3331adcc5a5
DOI
10.1101/2025.08.13.669859
Open publication

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Human outbreak detection and best practice MPXV analysis and interpretation with squirrelDOI 10.1101/2025.08.13.669859
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