Article

Longest protein, longest transcript or most expression, for accurate gene reconstruction of transcriptomes?

2019-11-02

Abstract excerpt

<h4>Methods: </h4> of transcript assembly and reduction filters are compared for recovery of reference gene sets of human, pig and plant, including longest coding sequence with EvidentialGene, longest transcript with CD-HIT, and most RNA-seq with TransRate. EvidentialGene methods are the most accurate in recovering reference genes, and maintain accuracy for alternate transcripts and paralogs. In comparison, filter...

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Literature Corpus work: 9a9003e4-496b-576d-b673-e19c8b4298ee
DOI: 10.1101/829184

Open publication

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