Article

Generating closed bacterial genomes from long-read nanopore sequencing of microbiomes

2018-12-09

Abstract excerpt

We present the first method for efficient recovery of complete, closed genomes directly from microbiomes using nanopore long-read sequencing and assembly. We apply our approach to three healthy human gut communities and compare results to short read and read cloud approaches. We obtain nine finished genomes including the first reported closed genome of Prevotella copri , an organism with highly repetitive genome...

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Literature Corpus work: 975a9f91-40d1-56db-a0a8-2f02f3ba26a5
DOI: 10.1101/489641

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