Article

Microsatellite Density Landscapes Illustrate Short Tandem Repeats Aggregation in The Complete Reference Human Genome

2022-04-16

Abstract excerpt

<h4>Background</h4> Microsatellites are increasingly realized to have biological significance in human genome and health in past decades, the assembled complete reference sequence of human genome T2T-CHM13 brought great help for a comprehensive study of short tandem repeats in the human genome. <h4>Results</h4> Microsatellites density landscapes of all 24 chromosomes were built here for the first complete refere...

Topics

Open a Topic to create a Post that cites this publication.

Identifiers and source

Literature Corpus work: 96bd0819-1ea0-5284-99a1-f9f595d53fba
DOI: 10.1101/2022.04.16.487617

Open publication

Related research

Semantic proximity does not establish scientific evidence.

Click a neighbor to travelStep 1 · 12 closest

Microsatellite Density Landscapes Illustrate Short Tandem Repeats Aggregation in The Complete Reference Human GenomeDOI 10.1101/2022.04.16.487617Read

Clarified an rDNA Gene Unit Pattern with (CTTT)n and (CT)n Microsatellites Aggregation Ahead of and Behind the Gene in Human GenomeSemantic proximity Read

Defining a tandem repeat catalog and variation clusters for genome-wide analysesSemantic proximity Read

Characterization of genome-wide STR variation in 6487 human genomes.Semantic proximity Read

Population-scale variability at short tandem repeat loci reveals pathogenicity signatureSemantic proximity Read

Computational and experimental hunt for expansion prone tandem CNG repeats in human genomesSemantic proximity Read

Genome-wide maps of highly-similar intrachromosomal repeats that mediate ectopic recombination in three human genome assembliesSemantic proximity Read

STRIDE-DB: a comprehensive database for exploration of instability and phenotypic relevance of short tandem repeats in the human genome.Semantic proximity Read

FuzzyClusTeR: a web server for analysis of tandem and diffuse DNA repeat clusters with application to telomeric-like repeatsSemantic proximity Read

Genome-wide Survey of Tandem Repeats by Nanopore Sequencing Shows that Disease-associated Repeats are More Polymorphic in the General PopulationSemantic proximity Read

Resolving the unsolved: Comprehensive assessment of tandem repeats at scaleSemantic proximity Read

Comparative analyses of human single- and multilocus tandem repeats.Semantic proximity Read

Heterogeneous distribution of SNPs in the human genome: microsatellites as predictors of nucleotide diversity and divergence.Semantic proximity Read