Article

An accurate assignment test for extremely low-coverage whole-genome sequence data

2021-06-07

Abstract excerpt

Genomic assignment tests can provide important diagnostic biological characteristics, such as population of origin or ecotype. In ancient DNA research, such characters can provide further information on population continuity, evolution, climate change, species migration, or trade, depending on archaeological context. Yet, assignment tests often rely on moderate- to high-coverage sequence data, which can be difficu...

Topics

Open a Topic to create a Post that cites this publication.

Identifiers and source

Literature Corpus work: 944792fc-40c9-5daa-bf59-ee9cd6b4d153
DOI: 10.1101/2021.06.04.447098

Open publication

Related research

Semantic proximity does not establish scientific evidence.

Click a neighbor to travelStep 1 · 12 closest

An accurate assignment test for extremely low-coverage whole-genome sequence dataDOI 10.1101/2021.06.04.447098Read

An accurate assignment test for extremely low-coverage whole-genome sequence data.Semantic proximity Read

Improving ancient DNA read mapping against modern reference genomes.Semantic proximity Read

TKGWV2: an ancient DNA relatedness pipeline for ultra-low coverage whole genome shotgun data.Semantic proximity Read

A curated dataset of modern and ancient high-coverage shotgun human genomesSemantic proximity Read

BREADR: An R Package for the Bayesian Estimation of Genetic Relatedness from Low-coverage Genotype DataSemantic proximity Read

A High-Coverage Mesolithic Aurochs Genome and Effective Leveraging of Ancient Cattle Genomes Using Whole Genome Imputation.Semantic proximity Read

Inferring biological kinship in ancient datasets: comparing the response of ancient DNA-specific software packages to low coverage data.Semantic proximity Read

Estimating allele frequencies, ancestry proportions and genotype likelihoods in the presence of mapping bias.Semantic proximity Read

AD-LIBS: inferring ancestry across hybrid genomes using low-coverage sequence data.Semantic proximity Read

A method for positive forensic identification of samples from extremely low-coverage sequence data.Semantic proximity Read

yallHap: Modern Y-chromosome haplogroup inference with probabilistic scoring and ancient DNA supportSemantic proximity Read

Detecting Structural Variants and Associated Gene Presence-Absence Variation Phenomena in the Genomes of Marine Organisms.Semantic proximity Read