Article

UltraSEQ: a universal bioinformatic platform for information-based clinical metagenomics and beyond

2022-08-26

Abstract excerpt

Applied metagenomics is a powerful emerging capability enabling untargeted detection of pathogens, and its application in clinical diagnostics promises to alleviate the limitations of current targeted assays. While metagenomics offers a hypothesis-free approach to identify any pathogen, including unculturable and potentially novel pathogens, its application in clinical diagnostics has so far been limited by workfl...

Topics

Open a Topic to create a Post that cites this publication.

Identifiers and source

Literature Corpus work: 84859b41-5a78-56d9-bd1e-a2107414b1dc
DOI: 10.1101/2022.08.24.505213

Open publication

Related research

Semantic proximity does not establish scientific evidence.

Click a neighbor to travelStep 1 · 12 closest

UltraSEQ: a universal bioinformatic platform for information-based clinical metagenomics and beyondDOI 10.1101/2022.08.24.505213Read

Yield of clinical metagenomics: insights from real-world practice for tissue infectionsSemantic proximity Read

Experience of implementing metagenomic next-generation sequencing in patients with suspected pulmonary infection in clinical practiceSemantic proximity Read

Evaluating performance of metagenomic characterization algorithms using <i>in silico</i> datasets generated with FASTQSimSemantic proximity Read

Enhancing Clinical Utility: Utilization of International Standards and Guidelines for Metagenomic Sequencing in Infectious Disease DiagnosisSemantic proximity Read

Application of metagenomic next-generation sequencing in pathogen detection of lung infectionsSemantic proximity Read

PanGIA: A Metagenomics Analytical Framework for Routine Biosurveillance and Clinical Pathogen DetectionSemantic proximity Read

The Role of Metagenomics and Next-Generation Sequencing in Infectious Disease DiagnosisSemantic proximity Read

Evaluating metagenomics and targeted approaches for diagnosis and surveillance of virusesSemantic proximity Read

Metagenomic next-generation sequencing Reveals Respiratory Pathogen distribution in COVID-19Semantic proximity Read

Clinical metagenomics for diagnosis and surveillance of viral pathogensSemantic proximity Read

Diagnosis value of targeted and metagenomic sequencing in respiratory tract infectionSemantic proximity Read

Improving Suspected Pulmonary Infection Diagnosis by Bronchoalveolar Lavage Fluid Metagenomic Next-Generation Sequencing: a Multicenter Retrospective StudySemantic proximity Read