Article

Ultra-fast Prediction of Somatic Structural Variations by Reduced Read Mapping via Pan-Genome <i>k</i> -mer Sets

2020-10-26

Abstract excerpt

<h4>ABSTRACT</h4> Genome rearrangements often result in copy number alterations of cancer-related genes and cause the formation of cancer-related fusion genes. Current structural variation (SV) callers, however, still produce massive numbers of false positives (FPs) and require high computational costs. Here, we introduce an ultra-fast and high-performing somatic SV detector, called ETCHING, that significantly re...

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Literature Corpus work: 826555c6-5031-5456-a2fa-cb875ba42bf5
DOI: 10.1101/2020.10.25.354456

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Ultra-fast Prediction of Somatic Structural Variations by Reduced Read Mapping via Pan-Genome <i>k</i> -mer SetsDOI 10.1101/2020.10.25.354456Read

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