Article

Phylogenetic factorization of compositional data yields lineage-level associations in microbiome datasets

2017-01-03

Abstract excerpt

Marker gene sequencing of microbial communities has generated big datasets of microbial relative abundances varying across environmental conditions, sample sites and treatments. These data often come with putative phylogenies, providing unique opportunities to investigate how shared evolutionary history affects microbial abundance patterns. Here, we present a method to identify the phylogenetic factors driving pat...

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Literature Corpus work: 81d66ea9-6e4a-5fa0-82ab-3de87d26cb2a
DOI: 10.7287/peerj.preprints.2685v1

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