Back to search

Article

Resource: A Curated Database of Brain-Related Functional Gene Sets (Brain.GMT)

2024-04-10

Abstract excerpt

Transcriptional profiling has become a common tool for investigating the nervous system. During analysis, differential expression results are often compared to functional ontology databases, which contain curated gene sets representing well-studied pathways. This dependence can cause neuroscience studies to be interpreted in terms of functional pathways documented in better studied tissues ( e . g ., liver) and...

Topics

Open a Topic to create a Post that cites this publication.

Identifiers and source

Literature Corpus work
7df45c13-5af0-57a4-b877-f1832b642566
DOI
10.1101/2024.04.05.588301
Open publication

Related research

Semantic proximity does not establish scientific evidence.

Click a neighbor to travelStep 1 · 12 closest
Interactive article relationship graphSelect a related publication card to move it into the centre and load its closest explainable connections. Solid lines are source-backed structured connections. Dashed lines are semantic discovery signals and are not scientific evidence.
Resource: A Curated Database of Brain-Related Functional Gene Sets (Brain.GMT)DOI 10.1101/2024.04.05.588301
BrainBase: a curated knowledgebase for brain diseasesSemantic proximity
Online database for brain cancer-implicated genes: exploring the subtype-specific mechanisms of brain cancerSemantic proximity
BrainProt(™) 3.0: Understanding Human Brain Diseases using comprehensively curated & Integrated OMICS datasetsSemantic proximity
BrainEXP-NPD: a database of transcriptomic profiles of human brains of six neuropsychiatric disordersSemantic proximity
<i>recount-brain</i> : a curated repository of human brain RNA-seq datasets metadataSemantic proximity
Brain Extracellular Matrix implications in multiple neurological disorders are revealed through a meta-analysis of transcriptional changesSemantic proximity
Identification of significant modules and hub genes involved in hepatic encephalopathy using WGCNASemantic proximity
Analysis of whole genome-transcriptomic organization in brain to identify genes associated with alcoholismSemantic proximity
Common mechanisms in neurodegeneration and neuroinflammation: a BrainNet Europe gene expression microarray studySemantic proximity
Curation of over 10,000 transcriptomic studies to enable data reuseSemantic proximity
Conserved Cell-Type-Specific Transcriptomic Networks and Regulatory Programs Underlie Alcohol Dependence Across Mouse and HumanSemantic proximity
WGCNA and Machine Learning for Screening Potential Biomarkers in traumatic brain injurySemantic proximity
Select a neighboring publication to make it the new centre.