Article

BALSA: Integrated secondary analysis for whole-genome and whole-exome sequencing, accelerated by GPU

2014-04-25

Abstract excerpt

This paper reports an integrated solution, called BALSA, for the secondary analysis of next generation sequencing data; it exploits the computational power of GPU and an intricate memory management to give a fast and accurate analysis. From raw reads to variants (including SNPs and Indels), BALSA, using just a single computing node with a commodity GPU board, takes 5.5 hours to process 50-fold whole genome sequenc...

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Identifiers and source

Literature Corpus work: 78d3dece-c666-5cba-b7a5-af83994c5436
DOI: 10.7287/peerj.preprints.373v1

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