Back to search

Article

A novel multi SNP based method for the identification of subspecies and associated lineages and sub-lineages of the <i>Mycobacterium tuberculosis</i> complex by whole genome sequencing

2017-11-05

Abstract excerpt

The clinical phenotype of zoonotic tuberculosis, its contribution to the global burden of disease and prevalence are poorly understood and probably underestimated. This is partly because currently available laboratory and in silico tools have not been calibrated to accurately identify all subspecies of the Mycobacterium tuberculosis complex ( Mtbc ). We here present the first such tool, SNPs to Identify TB (‘SN...

Topics

Open a Topic to create a Post that cites this publication.

Identifiers and source

Literature Corpus work
6f112b2b-fed4-5676-9978-903e26dc8d1b
DOI
10.1101/213850
Open publication

Related research

Semantic proximity does not establish scientific evidence.

Click a neighbor to travelStep 1 · 12 closest
Interactive article relationship graphSelect a related publication card to move it into the centre and load its closest explainable connections. Solid lines are source-backed structured connections. Dashed lines are semantic discovery signals and are not scientific evidence.
A novel multi SNP based method for the identification of subspecies and associated lineages and sub-lineages of the <i>Mycobacterium tuberculosis</i> complex by whole genome sequencingDOI 10.1101/213850
SNP-IT Tool for Identifying Subspecies and Associated Lineages of Mycobacterium tuberculosis ComplexSemantic proximity
Whole Genome Sequencing based Identification of Human Tuberculosis caused by Animal-lineage <i>Mycobacterium orygis</i>Semantic proximity
Whole genome sequencing-based identification of human tuberculosis caused by animal-lineage Mycobacterium orygis.Semantic proximity
Robust barcoding and identification of Mycobacterium tuberculosis lineages for epidemiological and clinical studies.Semantic proximity
A new nomenclature for the livestock-associated Mycobacterium tuberculosis complex based on phylogenomicsSemantic proximity
A revised SNP-based barcoding scheme for typing Mycobacterium tuberculosis complex isolates.Semantic proximity
Exploring the zoonotic potential of Mycobacterium bovis using variant calling approachesSemantic proximity
Zoonotic tuberculosis in India: looking beyond <i>Mycobacterium bovis</i>Semantic proximity
Population structure, biogeography and transmissibility of <i>Mycobacterium tuberculosis</i>Semantic proximity
A robust SNP barcode for typing Mycobacterium tuberculosis complex strains.Semantic proximity
Population structure, biogeography and transmissibility of Mycobacterium tuberculosis.Semantic proximity
A Comprehensive Map of Mycobacterium tuberculosis Complex Regions of Difference.Semantic proximity
Select a neighboring publication to make it the new centre.