Article

GPU-accelerated alignment of bisulfite-treated short-read sequences

2017-08-25

Abstract excerpt

The alignment of bisulfite-treated DNA sequences (BS-seq reads) to a large genome involves a significant computational burden beyond that required to align non-bisulfite-treated reads. In the analysis of BS-seq data, this can present an important performance bottleneck that can potentially be addressed by appropriate software-engineering and algorithmic improvements. One strategy is to integrate this additional pr...

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Literature Corpus work: 6ad50a56-bb16-5119-9b55-a4062263f225
DOI: 10.1101/175729

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