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Longitudinal linked read sequencing reveals ecological and evolutionary responses of a human gut microbiome during antibiotic treatment

2019-12-23

Abstract excerpt

Gut microbial communities can respond to antibiotic perturbations by rapidly altering their taxonomic and functional composition. However, little is known about the strain-level processes that drive this collective response. Here we characterize the gut microbiome of a single individual at high temporal and genetic resolution through a period of health, disease, antibiotic treatment, and recovery. We used deep, li...

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Identifiers and source

Literature Corpus work
65acc105-d659-5eea-83f9-50ce9ba950fc
DOI
10.1101/2019.12.21.886093
Open publication

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Longitudinal linked read sequencing reveals ecological and evolutionary responses of a human gut microbiome during antibiotic treatmentDOI 10.1101/2019.12.21.886093
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