Article

Whole genome sequencing and comparative genomic analysis reveal novel allelic variations unique to a purple colored rice landrace ( <i>Oryza sativa ssp. indica</i> cv. Purpleputtu)

2019-01-31

Abstract excerpt

Purpleputtu ( Oryza sativa ssp. indica cv . Purpleputtu) is a unique rice landrace from southern India that exhibits predominantly purple color. This study reports the underlying genetic complexity of the trait and associated domestication and de-domestication processes during its coevolution with present day cultivars. Along-with genome level allelic variations in the entire gene repertoire associated with purpl...

Topics

Open a Topic to create a Post that cites this publication.

Identifiers and source

Literature Corpus work: 659dc9f6-6807-5bac-840d-7c94d2d5673c
DOI: 10.1101/536326

Open publication

Related research

Semantic proximity does not establish scientific evidence.

Click a neighbor to travelStep 1 · 12 closest

Whole genome sequencing and comparative genomic analysis reveal novel allelic variations unique to a purple colored rice landrace ( <i>Oryza sativa ssp. indica</i> cv. Purpleputtu)DOI 10.1101/536326Read

A gap-free telomere-to-telomere genome of the purple-pericarp rice landrace Mojiang ZN65 resolves transposon-driven structural variation at the pericarp-pigmentation lociSemantic proximity Read

Pan-genomic, transcriptomic, and miRNA analyses to decipher genetic diversity and anthocyanin pathway genes among the traditional rice landraces.Semantic proximity Read

A strategy for genome-wide identification of gene based polymorphisms in rice reveals non-synonymous variation and functional genotypic markers.Semantic proximity Read

Population genomic analysis unravels the evolutionary roadmap of pericarp color in rice.Semantic proximity Read

Genome-wide selection and introgression of Chinese rice varieties during breeding.Semantic proximity Read

Genomewide SNP variation reveals relationships among landraces and modern varieties of rice.Semantic proximity Read

Whole genome resequencing of four Italian sweet pepper landraces provides insights on sequence variation in genes of agronomic value.Semantic proximity Read

The PanOryza pangene catalog of Asian cultivated rice.Semantic proximity Read

Pan-genome analysis highlights the extent of genomic variation in cultivated and wild rice.Semantic proximity Read

A pan-gene catalogue of Asian cultivated riceSemantic proximity Read

Genomic variation in 3,010 diverse accessions of Asian cultivated rice.Semantic proximity Read

Breeding signatures of rice improvement revealed by a genomic variation map from a large germplasm collection.Semantic proximity Read