Article
Genomic variation in 3,010 diverse accessions of Asian cultivated rice.
Nature - 1 May 2018
Wang Wensheng, Mauleon Ramil, Hu Zhiqiang, Chebotarov Dmytro, Tai Shuaishuai, Wu Zhichao, Li Min, Zheng Tianqing, Fuentes Roven Rommel, Zhang Fan, Mansueto Locedie, Copetti Dario, Sanciangco Millicent, Palis Kevin Christian, Xu Jianlong, Sun Chen, Fu Binying, Zhang Hongliang, Gao Yongming, Zhao Xiuqin, Shen Fei, Cui Xiao, Yu Hong, Li Zichao, Chen Miaolin, Detras Jeffrey, Zhou Yongli, Zhang Xinyuan, Zhao Yue, Kudrna Dave, Wang Chunchao, Li Rui, Jia Ben, Lu Jinyuan, He Xianchang, Dong Zhaotong, Xu Jiabao, Li Yanhong, Wang Miao, Shi Jianxin, Li Jing, Zhang Dabing, Lee Seunghee, Hu Wushu, Poliakov Alexander, Dubchak Inna, Ulat Victor Jun, Borja Frances Nikki, Mendoza John Robert, Ali Jauhar, Li Jing, Gao Qiang, Niu Yongchao, Yue Zhen, Naredo Ma Elizabeth B, Talag Jayson, Wang Xueqiang, Li Jinjie, Fang Xiaodong, Yin Ye, Glaszmann Jean-Christophe, Zhang Jianwei, Li Jiayang, Hamilton Ruaraidh Sackville, Wing Rod A, Ruan Jue, Zhang Gengyun, Wei Chaochun, Alexandrov Nickolai, McNally Kenneth L, Li Zhikang, Leung Hei
Abstract excerpt
Here we analyse genetic variation, population structure and diversity among 3,010 diverse Asian cultivated rice (Oryza sativa L.) genomes from the 3,000 Rice Genomes Project. Our results are consistent with the five major groups previously recognized, but also suggest several unreported subpopulations that correlate with geographic location. We identified 29 million single nucleotide polymorphisms, 2.4 million...
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