Article

Path-dependent recovery of the gut microbiome after antibiotics emerges from coupled ecological and evolutionary dynamics

2026-05-23

Abstract excerpt

<h4>ABSTRACT</h4> Recovery of the gut microbiome after antibiotic exposure is often incomplete and variable, and the processes underlying this variation remain unclear. We performed longitudinal shotgun metagenomic sequencing of 2876 daily fecal samples from replicated humanized and conventional mouse cohorts exposed to controlled antibiotic perturbations. Metagenomic profiling recapitulated ecological trajectori...

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Identifiers and source

Literature Corpus work: 62a31c24-71f1-5ef8-92aa-636ab702375a
DOI: 10.64898/2026.05.22.727306

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