Pepid: a Highly Modifiable, Bioinformatics-Oriented Peptide Search Engine

Abstract excerpt

<h4>Motivation</h4> Current peptide search engines are optimized for wet-lab workflows, i.e. they operate in an “end-to-end” manner to achieve good identification results, not to be modified or provide algorithmic insight. This makes developing new software methods to solve problems in peptide identification methods difficult, often requiring a full engine rewrite. Recently, many deep learning methods were propos...

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• Chemical Synthesis and Analysis
• Monoclonal and Polyclonal Antibodies Research
• vaccines and immunoinformatics approaches

Identifiers and source

Literature Corpus work

60847d4c-0708-56b2-aa92-6515e484c3b2

DOI

10.1101/2023.10.30.564469