Article

Overcoming Limitations to Deep Learning in Domesticated Animals with TrioTrain

2024-04-20

Abstract excerpt

<h4>ABSTRACT</h4> Variant calling across diverse species remains challenging as most bioinformatics tools default to assumptions based on human genomes. DeepVariant (DV) excels without joint genotyping while offering fewer implementation barriers. However, the growing appeal of a “universal” algorithm has magnified the unknown impacts when used with non-human genomes. Here, we use bovine genomes to assess the lim...

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Literature Corpus work: 5bd146d3-ad56-5ccd-815a-b4c5baebb4a4
DOI: 10.1101/2024.04.15.589602

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