Article

Parapipe: A Pipeline for Parasite Next-Generation Sequencing Data Analysis Applied to Cryptosporidium

2025-06-18

Abstract excerpt

Cryptosporidium, a protozoan parasite of significant public health concern, is responsible for severe diarrheal disease, particularly in immunocompromised individuals and young children in resource-limited settings. Analysis of whole genome next generation sequencing (NGS) data is critical in improving our understanding of Cryptosporidium epidemiology, transmission, and diversity. However, effective analysis of NG...

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Literature Corpus work: 45cee964-f99c-541e-bb71-b13d356fb342
DOI: 10.1099/acmi.0.000993.v2

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