Article

Single cell gene set scoring with nearest neighbor graph smoothed data (gssnng)

2022-12-02

Abstract excerpt

Gene set scoring (or enrichment) is a common dimension reduction task in bioinformatics that can be focused on differences between groups or at the single sample level. Gene sets can represent biological functions, molecular pathways, cell identities, and more. Gene set scores are context dependent values that are useful for interpreting biological changes following experiments or perturbations. Single sample scor...

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Literature Corpus work: 3dae9656-dac8-5d5e-b756-9f7e95a7ed7d
DOI: 10.1101/2022.11.29.518384

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