Article

Using image-based haplotype alignments to map global adaptation of SARS-CoV-2

2021-01-13

Abstract excerpt

Quantifying evolutionary change among viral genomes is an important clinical device to track critical adaptations geographically and temporally. We built image-based haplotype-guided evolutionary inference (ImHapE) to quantify adaptations in expanding populations of non-recombining SARS-CoV-2 genomes. By combining classic population genetic summaries with image-based deep learning methods, we show that different r...

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Literature Corpus work: 3b03f414-22a7-5c06-98de-9b6211a55c4c
DOI: 10.1101/2021.01.13.426571

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