Article

Alcov: Estimating Variant of Concern Abundance from SARS-CoV-2 Wastewater Sequencing Data

2021-06-06

Abstract excerpt

Detection of SARS-CoV-2 in wastewater is an important strategy for community level surveillance. Variants of concern (VOCs) can be detected in the wastewater samples using next generation sequencing, however it can be challenging to determine the relative abundance of different VOCs since the reads cannot be assembled into complete genomes. Here, we present Alcov (abundance learning of SARS-CoV-2 variants), a tool...

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Literature Corpus work: 39223445-84c4-5aa3-9ee7-8c47287e113b
DOI: 10.1101/2021.06.03.21258306

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