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Detection and Tracking of SARS-CoV-2 Lineages through National Wastewater Surveillance System Pathogen Genomics

1 Apr 2025

Abstract excerpt

We conducted retrospective analysis of the emergence of the SARS-CoV-2 JN.1 variant in US wastewater during November 2023-July 2024 using Aquascope, a bioinformatics pipeline for the National Wastewater Surveillance System. This study highlights the value of open-source bioinformatics tools in tracking pathogen variants for public health monitoring.

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Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

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PMID: 40359077
DOI: 10.3201/eid3113.241411

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