Article

Adding layers of information to scRNA-seq data using pre-trained language models

2025-08-27

Abstract excerpt

Pre-trained language models promise to enrich analyses of single-cell data with additional layers of information leveraging large text corpora. Yet, it is still unclear how to achieve optimal alignment with the primary quantitative single-cell data. To address this, we construct text-based training datasets from both scRNA-seq data and biomedical literature targeted to the experimental setting at hand. We then joi...

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Literature Corpus work: 375fc8a6-5b84-51c6-be3f-3ff6c554062b
DOI: 10.1101/2025.08.23.671699

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