Back to search

Article

Comparative genomics of <i>Bordetella pertussis</i> isolates from New Zealand, a country with an uncommonly high incidence of whooping cough

2021-10-12

Abstract excerpt

2. Whooping cough, the respiratory disease caused by Bordetella pertussis , has undergone a wide-spread resurgence over the last several decades. Previously, we developed a pipeline to assemble the repetitive B. pertussis genome into closed sequences using hybrid nanopore and Illumina sequencing. Here, this sequencing pipeline was used to conduct a more high-throughput, longitudinal screen of 66 strains isolated...

Topics

Open a Topic to create a Post that cites this publication.

Identifiers and source

Literature Corpus work
32dd24c1-073b-573f-a7ce-a8aadf4249d0
DOI
10.1101/2021.10.11.463938
Open publication

Related research

Semantic proximity does not establish scientific evidence.

Click a neighbor to travelStep 1 · 12 closest
Interactive article relationship graphSelect a related publication card to move it into the centre and load its closest explainable connections. Solid lines are source-backed structured connections. Dashed lines are semantic discovery signals and are not scientific evidence.
Comparative genomics of <i>Bordetella pertussis</i> isolates from New Zealand, a country with an uncommonly high incidence of whooping coughDOI 10.1101/2021.10.11.463938
Comparative genomics of Bordetella pertussis isolates from New Zealand, a country with an uncommonly high incidence of whooping coughSemantic proximity
Genomic dissection of the microevolution of Australian epidemic <i>Bordetella pertussis</i>Semantic proximity
Global Population Structure and Evolution of Bordetella pertussis and Their Relationship with VaccinationSemantic proximity
Comparison of library preparation and sequencing depths for direct sequencing of <i>Bordetella pertussis</i> positive samplesSemantic proximity
Genomic analysis of isolates from the United Kingdom 2012 pertussis outbreak reveals that vaccine antigen genes are unusually fast evolving.Semantic proximity
Molecular epidemiology and genomic features of Bordetella pertussis in Tianjin, China, 2023.Semantic proximity
Genomic evaluation of <i>Bordetella spp</i> . originating from AustraliaSemantic proximity
Analysis of clinical <i>Bordetella pertussis</i> isolates using whole genome sequences reveals novel genomic regions associated with recent outbreaks in the United States of AmericaSemantic proximity
Bordetella pertussis population dynamics and phylogeny in Japan after adoption of acellular pertussis vaccines.Semantic proximity
No innocent bystanders: pertussis vaccination epitomizes evolutionary parallelisms between <i>Bordetella parapertussis</i> and <i>B. pertussis</i>Semantic proximity
Targeted Culture-Independent Sequencing Identifies Emergence of Macrolide-Resistant<i>Bordetella Pertussis</i>in AustraliaSemantic proximity
Genomic dissection of the microevolution of Australian epidemic Bordetella pertussisSemantic proximity
Select a neighboring publication to make it the new centre.