Article

Inference of differential gene regulatory networks from gene expression data using boosted differential trees

2022-09-27

Abstract excerpt

Diseases can be caused by molecular perturbations that induce specific changes in regulatory interactions and their coordinated expression, also referred to as network rewiring. However, the detection of complex changes in regulatory connections remains a challenging task and would benefit from the development of novel non-parametric approaches. We developed a new ensemble method called BoostDiff (boosted differen...

Topics

Open a Topic to create a Post that cites this publication.

Identifiers and source

Literature Corpus work: 21127ac3-7740-58f8-a16b-592d5b192fb9
DOI: 10.1101/2022.09.26.509450

Open publication

Related research

Semantic proximity does not establish scientific evidence.

Click a neighbor to travelStep 1 · 12 closest

Inference of differential gene regulatory networks from gene expression data using boosted differential treesDOI 10.1101/2022.09.26.509450Read

DGCA: A comprehensive R package for Differential Gene Correlation Analysis.Semantic proximity Read

Understanding Complex Systems through DifferentialCausal NetworksSemantic proximity Read

Identifying Network Perturbation in CancerSemantic proximity Read

multiDEGGs: a multi-omic differential network analysis package for biomarker discovery and predictive modelingSemantic proximity Read

DiNeR: a <i>Di</i> fferential Graphical Model for analysis of co-regulation <i>Ne</i> twork <i>R</i> ewiringSemantic proximity Read

Incorporating prior biological knowledge for network-based differential gene expression analysis using differentially weighted graphical LASSOSemantic proximity Read

A bootstrap model comparison test for identifying genes with context-specific patterns of genetic regulationSemantic proximity Read

Efficient Proximal Gradient Algorithm for Inference of Differential Gene NetworksSemantic proximity Read

Non Parametric Differential Network Analysis: A Tool for Unveiling Specific Molecular SignaturesSemantic proximity Read

A personalized network framework reveals predictive axis of anti-TNF response across diseasesSemantic proximity Read

GEOlimma: Differential Expression Analysis and Feature Selection Using Pre-Existing Microarray DataSemantic proximity Read

Robust phenotype prediction from gene expression data using differential shrinkage of co-regulated genes.Semantic proximity Read