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Benchmarking of real-time, field-deployable whole-genome sequencing of Plasmodium falciparum using Nanopore technology.

Microbial genomics - 1 Jul 2026

Razook Zahra, Mehra Somya, Naung Myo T, Gilchrist Brittany, Wijegunasekara Sachintha, Utama Digjaya, Lautu-Gumal Dulcie, Fola Abebe A, Menard Didier, Kazura James, Laman Moses, Mueller Ivo, Robinson Leanne J, Bahlo Melanie, Barry Alyssa E

Abstract excerpt

Malaria parasite genomes have been generated predominantly using Illumina short-read sequencing that requires expensive equipment, is time-consuming with complex protocols, and does not adequately interrogate complex genomic regions that harbour important malaria virulence determinants. The portable Oxford Nanopore Technologies MinION platform generates long reads in real time and may overcome these limitations....

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Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

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Identifiers

PMID: 42525447
DOI: 10.1099/mgen.0.001776
PMCID: PMC13435551

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