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SwarmGenomics: A Unified Pipeline for Individual-Based Whole-Genome Analyses.

Molecular ecology resources - 1 Apr 2026

Kylmänen Aure, Chen Yu-Chi, Javaheri Tehrani Sahar, Vellnow Nikolas, Wilcox Justin J S, Gossmann Toni I

Abstract excerpt

Advances in sequencing technologies have made whole-genome data widely accessible, enabling research in population genetics, evolutionary biology, and conservation. However, analysing whole-genome sequencing (WGS) data remains challenging, often requiring multiple specialised tools and substantial bioinformatics expertise. We present SwarmGenomics, a modular, user-friendly command-line pipeline for...

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PMID: 41854043
DOI: 10.1111/1755-0998.70119
PMCID: PMC13000882

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