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Article

AmpSeqR: an R package for amplicon deep sequencing data analysis.

F1000Research - 1 Jan 2023

Han Jiru, Munro Jacob E, Bahlo Melanie

Abstract excerpt

Amplicon sequencing (AmpSeq) is a methodology that targets specific genomic regions of interest for polymerase chain reaction (PCR) amplification so that they can be sequenced to a high depth of coverage. Amplicons are typically chosen to be highly polymorphic, usually with several highly informative, high frequency single nucleotide polymorphisms (SNPs) segregating in an amplicon of 100-200 base pair (bp). This...

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PMID: 39584015
DOI: 10.12688/f1000research.129581.2
PMCID: PMC11584457

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