SAKit: An all-in-one analysis pipeline for identifying novel proteins resulting from variant events at both large and small scales.

Abstract excerpt

Background: Genetic mutations that cause the inactivation or aberrant activation of essential proteins may trigger alterations or even dysfunctions in cellular signaling pathways, culminating in the development of precancerous lesions and cancer. Mutations and such dysfunctions can result in the generation of "novel proteins" that are not part of the conventional human proteome. Identification of these proteins...

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