Article
Construction of relatedness matrices in autopolyploid populations using low-depth high-throughput sequencing data.
TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik - 2 Mar 2024
Bilton Timothy P, Sharma Sanjeev Kumar, Schofield Matthew R, Black Michael A, Jacobs Jeanne M E, Bryan Glenn J, Dodds Ken G
Abstract excerpt
KEY MESSAGE: An improved estimator of genomic relatedness using low-depth high-throughput sequencing data for autopolyploids is developed. Its outputs strongly correlate with SNP array-based estimates and are available in the package GUSrelate. High-throughput sequencing (HTS) methods have reduced sequencing costs and resources compared to array-based tools, facilitating the investigation of many non-model...
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