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Article

Construction of relatedness matrices using genotyping-by-sequencing data.

BMC genomics - 9 Dec 2015

Dodds Ken G, McEwan John C, Brauning Rudiger, Anderson Rayna M, van Stijn Tracey C, Kristjánsson Theodor, Clarke Shannon M

Abstract excerpt

BACKGROUND: Genotyping-by-sequencing (GBS) is becoming an attractive alternative to array-based methods for genotyping individuals for a large number of single nucleotide polymorphisms (SNPs). Costs can be lowered by reducing the mean sequencing depth, but this results in genotype calls of lower quality. A common analysis strategy is to filter SNPs to just those with sufficient depth, thereby greatly reducing the...

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Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

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Identifiers

PMID: 26654230
DOI: 10.1186/s12864-015-2252-3
PMCID: PMC4675043

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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