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Polly: An R package for genotyping microsatellites and detecting highly polymorphic DNA markers from short-read data.

Molecular ecology resources - 1 May 2024

Perry Annabel, Eddelbuettel Dirk, Rosenthal Gil, Blackmon Heath

Abstract excerpt

Highly polymorphic markers, such as microsatellites, are invaluable for the study of natural populations. However, contemporary methods for genotyping highly polymorphic variants have serious drawbacks that impede their efficiency. We created Polly, an R package with C++ source code that uses Illumina short-read data to genotype microsatellites, detect highly polymorphic variants and identify clusters of highly...

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PMID: 38299378
DOI: 10.1111/1755-0998.13933
PMCID: PMC10994724

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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