Development and preliminary evaluation of a 90 K Axiom® SNP array for the allo-octoploid cultivated strawberry Fragaria × ananassa.

doi:10.1186/s12864-015-1310-1

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Article

Development and preliminary evaluation of a 90 K Axiom® SNP array for the allo-octoploid cultivated strawberry Fragaria × ananassa.

BMC genomics - 7 Mar 2015

Bassil Nahla V, Davis Thomas M, Zhang Hailong, Ficklin Stephen, Mittmann Mike, Webster Teresa, Mahoney Lise, Wood David, Alperin Elisabeth S, Rosyara Umesh R, Koehorst-Vanc Putten Herma, Monfort Amparo, Sargent Daniel J, Amaya Iraida, Denoyes Beatrice, Bianco Luca, van Dijk Thijs, Pirani Ali, Iezzoni Amy, Main Dorrie, Peace Cameron, Yang Yilong, Whitaker Vance, Verma Sujeet, Bellon Laurent, Brew Fiona, Herrera Raul, van de Weg Eric

Abstract excerpt

BACKGROUND: A high-throughput genotyping platform is needed to enable marker-assisted breeding in the allo-octoploid cultivated strawberry Fragaria × ananassa. Short-read sequences from one diploid and 19 octoploid accessions were aligned to the diploid Fragaria vesca 'Hawaii 4' reference genome to identify single nucleotide polymorphisms (SNPs) and indels for incorporation into a 90 K Affymetrix® Axiom® array....

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PMID: 25886969
DOI: 10.1186/s12864-015-1310-1
PMCID: PMC4374422

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

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