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Haplotag: Software for Haplotype-Based Genotyping-by-Sequencing Analysis.

G3 (Bethesda, Md.) - 7 Apr 2016

Tinker Nicholas A, Bekele Wubishet A, Hattori Jiro

Abstract excerpt

Genotyping-by-sequencing (GBS), and related methods, are based on high-throughput short-read sequencing of genomic complexity reductions followed by discovery of single nucleotide polymorphisms (SNPs) within sequence tags. This provides a powerful and economical approach to whole-genome genotyping, facilitating applications in genomics, diversity analysis, and molecular breeding. However, due to the complexity of...

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PMID: 26818073
DOI: 10.1534/g3.115.024596
PMCID: PMC4825656

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