Article
SNP discovery in nonmodel organisms: strand bias and base-substitution errors reduce conversion rates.
Molecular ecology resources - 1 Jul 2015
Gonçalves da Silva Anders, Barendse William, Kijas James W, Barris Wes C, McWilliam Sean, Bunch Rowan J, McCullough Russell, Harrison Blair, Hoelzel A Rus, England Phillip R
Abstract excerpt
Single nucleotide polymorphisms (SNPs) have become the marker of choice for genetic studies in organisms of conservation, commercial or biological interest. Most SNP discovery projects in nonmodel organisms apply a strategy for identifying putative SNPs based on filtering rules that account for random sequencing errors. Here, we analyse data used to develop 4723 novel SNPs for the commercially important deep-sea...
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