Article
Genome Capture Sequencing Selectively Enriches Bacterial DNA and Enables Genome-Wide Measurement of Intrastrain Genetic Diversity in Human Infections.
mBio - 26 Oct 2022
Hayden Hillary S, Joshi Snehal, Radey Matthew C, Vo Anh T, Forsberg Cara, Morgan Sarah J, Waalkes Adam, Holmes Elizabeth A, Klee Sara M, Emond Mary J, Singh Pradeep K, Salipante Stephen J
Abstract excerpt
Within-host evolution produces genetic diversity in bacterial strains that cause chronic human infections. However, the lack of facile methods to measure bacterial allelic variation in clinical samples has limited understanding of intrastrain diversity's effects on disease. Here, we report a new method termed genome capture sequencing (GenCap-Seq) in which users inexpensively make hybridization probes from...
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