Article
Genomic inbreeding coefficients using imputed genotypes: Assessing different estimators in Holstein-Friesian dairy cows.
Journal of dairy science - 1 Jul 2022
Dadousis Christos, Ablondi Michela, Cipolat-Gotet Claudio, van Kaam Jan-Thijs, Marusi Maurizio, Cassandro Martino, Sabbioni Alberto, Summer Andrea
Abstract excerpt
The objective of this study was to estimate inbreeding coefficients in Holstein dairy cattle using imputed SNPs data. A data set of 95,540 Italian Holstein dairy cows from the routine genomic evaluations of the Italian National Association of Holstein, Brown, and Jersey Breeders were analyzed, with 84,445 imputed SNP. Ten widely used genomic inbreeding estimators were tested, including 4 PLINK v1.9 estimators (F,...
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