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Diversity of genomic clusters and CfiA/cfiA alleles in Bacteroides fragilis isolates from human and animals.

Anaerobe - 1 Jun 2022

Cao Huiluo, Liu Melissa Chun-Jiao, Tong Man-Ki, Jiang Shuo, Lau Andes, Chow Kin-Hung, Tse Cindy Wing-Sze, Ho Pak-Leung

Abstract excerpt

OBJECTIVES: To compare the phylogeny of cfiA-positive Bacteroides fragilis isolates from diverse human and animal sources. METHOD: Complete genome sequences were obtained from 42 cfiA-positive B. fragilis isolates (Hong Kong, 2015-2017) and additional 24 genomes deposited in the GenBank (multiple countries, 1985-2019) were included. The genomic clusters were constructed using PopPUNK. The CfiA alleles and...

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PMID: 35427784
DOI: 10.1016/j.anaerobe.2022.102567

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