Article
Tumor cell enrichment by tissue suspension enables detection of mutations with low variant allele frequency and estimation of germline mutations.
Scientific reports - 22 Feb 2022
Hatakeyama Keiichi, Muramatsu Koji, Nagashima Takeshi, Kawanishi Yuichi, Fukumura Ryutaro, Ohshima Keiichi, Shimoda Yuji, Kenmotsu Hirotsugu, Mochizuki Tohru, Urakami Kenichi, Akiyama Yasuto, Sugino Takashi, Yamaguchi Ken
Abstract excerpt
Targeted sequencing offers an opportunity to select specific drugs for cancer patients based on alterations in their genome. However, accurate sequencing cannot be performed in cancers harboring diffuse tumor cells because of low tumor content. We performed tumor cell enrichment using tissue suspension of formalin-fixed, paraffin-embedded (FFPE) tissue sections with low tumor cell content. The enriched fractions...
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